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PUBLICATIONS

Journal

  • Ghosh, Priyanka, and Ananth Kalyanaraman. "FastEtch: A Fast Sketch-based Assembler for Genomes." IEEE/ACM Transactions on Computational Biology and Bioinformatics (2017).

Conference

  • Priyanka Ghosh, Ananth Kalyanaraman. A Fast Sketch-based Assembler for Genomes. Proc. ACM Conference on Bioinformatics, Computational Biology, and Health Informatics (ACM-BCB 2016) (Best Student Paper Award winner).

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Workshop

  • Priyanka Ghosh, Jeff Hammond, Sayan Ghosh and Barbara Chapman. Performance Analysis of the NWChem TCE for Different Communication Patterns. In Workshop on. Performance Modeling, Benchmarking and Simulation of High Performance Computer Systems (PMBS13), in conjunction with SC 2013.

  • Priyanka Ghosh, Yonghong Yan, Deepak Eachempati, and Barbara Chapman, A Prototype Implementation of OpenMP Task Dependency Support, in OpenMP in the Era of Low Power Devices and Accelerators, the 9th International Workshop on OpenMP (IWOMP2013), Canberra, Australia, September 2013.

  • Priyanka Ghosh, Yonghong Yan, Barbara Chapman. Support For Dependency Driven Executions Among OpenMP Tasks. Data-Flow Execution Models for Extreme Scale Computing (DFM 2012) Workshop in conjunction with PACT 2012.

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Poster

  • Priyanka Ghosh, Ananth Kalyanaraman. Approximation Strategies for Assembling Genomes At Scale. Presented at CRA-W Grad Cohort Workshop, April 2016, San Diego, CA.

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